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http://arks.princeton.edu/ark:/88435/dsp01m326m435m
Title: | Regulation Mechanism of H. sapiens Tutase II |
Authors: | Kolet-Mandrikov, David |
Advisors: | Korennykh, Alexei V. |
Department: | Molecular Biology |
Class Year: | 2017 |
Abstract: | TUT2 is a human non-canonical poly(A) polymerase which polyadenylates, monoadenylates, and monouridylates mRNA and miRNA in the cytoplasm (Chung et al., 2016). GLD2, the C. elegans homolog of TUT2 requires a partner protein, GLD3, for catalytic activity. OAS1, a structural homolog of GLD2, requires double-stranded RNA (dsRNA) induced conformational change to become a catalytically active oligoadenylate synthetase. Comparison of the OAS1•dsRNA and GLD2•GLD3 co-crystal structures revealed that dsRNA and GLD3 occupy equivalent sites on OAS1 and GLD2. The current model based on C. elegans is that GLD3 binding to GLD2 creates a positively charged RNA binding site (Nakel et al., 2015). However, based on the OAS1•dsRNA structure, we propose an alternative model in which GLD3 induces a conformational change in GLD2. To investigate these models, we used human TUT2 \(\Delta\)1-155, which is equivalent to the crystallized C. elegans GLD2. Surprisingly, we found that this construct is constitutively catalytically active and can polyadenylate RNA in isolation. Additionally, we found that at a concentration of 1.4 \(\mu\)M, a human BICC1 homologous fragment to GLD3 does not affect the activity of TUT2. Our findings indicate the nucleotidyl transferase domain in TUT2 alone is sufficient for polyadenylation. |
URI: | http://arks.princeton.edu/ark:/88435/dsp01m326m435m |
Type of Material: | Princeton University Senior Theses |
Language: | en_US |
Appears in Collections: | Molecular Biology, 1954-2020 |
Files in This Item:
File | Size | Format | |
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DKM_Thesis.pdf | 1.01 MB | Adobe PDF | Request a copy |
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